Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3yl1O08641 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.09■□□□□ 0.01
Sh3yl1O08641 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3yl1O08641 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3yl1O08641 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3yl1O08641 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.09■□□□□ 0.01
Sh3yl1O08641 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Sh3yl1O08641 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.09■□□□□ 0.01
Sh3yl1O08641 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.09■□□□□ 0.01
Sh3yl1O08641 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.09■□□□□ 0.01
Sh3yl1O08641 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3yl1O08641 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3yl1O08641 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Sh3yl1O08641 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sh3yl1O08641 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3yl1O08641 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3yl1O08641 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3yl1O08641 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3yl1O08641 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3yl1O08641 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3yl1O08641 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3yl1O08641 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3yl1O08641 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3yl1O08641 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3yl1O08641 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3yl1O08641 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3yl1O08641 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3yl1O08641 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3yl1O08641 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.08■□□□□ 0
Sh3yl1O08641 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3yl1O08641 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3yl1O08641 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3yl1O08641 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3yl1O08641 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3yl1O08641 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3yl1O08641 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3yl1O08641 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.08■□□□□ 0
Sh3yl1O08641 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3yl1O08641 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.08■□□□□ 0
Sh3yl1O08641 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Sh3yl1O08641 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3yl1O08641 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sh3yl1O08641 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3yl1O08641 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3yl1O08641 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3yl1O08641 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3yl1O08641 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3yl1O08641 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.08■□□□□ 0
Sh3yl1O08641 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3yl1O08641 Prob1-201ENSMUST00000097619 3021 ntBASIC15.08■□□□□ 0
Sh3yl1O08641 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sh3yl1O08641 Asic1-205ENSMUST00000228185 1818 ntBASIC15.08■□□□□ 0
Sh3yl1O08641 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3yl1O08641 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3yl1O08641 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Sh3yl1O08641 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3yl1O08641 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3yl1O08641 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3yl1O08641 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3yl1O08641 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sh3yl1O08641 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3yl1O08641 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3yl1O08641 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3yl1O08641 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.07■□□□□ 0
Sh3yl1O08641 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.07■□□□□ 0
Sh3yl1O08641 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sh3yl1O08641 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3yl1O08641 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3yl1O08641 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.07■□□□□ 0
Sh3yl1O08641 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3yl1O08641 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sh3yl1O08641 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sh3yl1O08641 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3yl1O08641 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Sh3yl1O08641 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3yl1O08641 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3yl1O08641 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3yl1O08641 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sh3yl1O08641 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.06■□□□□ 0
Sh3yl1O08641 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3yl1O08641 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sh3yl1O08641 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.06■□□□□ 0
Sh3yl1O08641 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.06■□□□□ 0
Sh3yl1O08641 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3yl1O08641 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3yl1O08641 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3yl1O08641 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3yl1O08641 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3yl1O08641 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3yl1O08641 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sh3yl1O08641 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3yl1O08641 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sh3yl1O08641 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sh3yl1O08641 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh3yl1O08641 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Sh3yl1O08641 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.05■□□□□ 0
Sh3yl1O08641 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Sh3yl1O08641 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sh3yl1O08641 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Sh3yl1O08641 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms