Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-3J3QMG8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-3J3QMG8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Gm15165-201ENSMUST00000118140 502 ntBASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Gm27867-201ENSMUST00000184778 125 ntBASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Gm17807-201ENSMUST00000186869 298 ntBASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav13d-3J3QMG8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Trav13d-3J3QMG8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-3J3QMG8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-3J3QMG8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav13d-3J3QMG8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-3J3QMG8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-3J3QMG8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-3J3QMG8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Trav13d-3J3QMG8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-3J3QMG8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-3J3QMG8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-3J3QMG8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-3J3QMG8 Gm7367-201ENSMUST00000057611 492 ntBASIC13.89□□□□□ -0.19
Trav13d-3J3QMG8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-3J3QMG8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-3J3QMG8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-3J3QMG8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-3J3QMG8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-3J3QMG8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-3J3QMG8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Gm12895-201ENSMUST00000122214 226 ntBASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Trav13d-3J3QMG8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms