Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.26■□□□□ 0.19
Atf6F6VAN0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Gm27704-201ENSMUST00000185094 107 ntBASIC16.25■□□□□ 0.19
Atf6F6VAN0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atf6F6VAN0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atf6F6VAN0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atf6F6VAN0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Atf6F6VAN0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atf6F6VAN0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Atf6F6VAN0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atf6F6VAN0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atf6F6VAN0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atf6F6VAN0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atf6F6VAN0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atf6F6VAN0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atf6F6VAN0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atf6F6VAN0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.24■□□□□ 0.19
Atf6F6VAN0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.24■□□□□ 0.19
Atf6F6VAN0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atf6F6VAN0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atf6F6VAN0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Atf6F6VAN0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atf6F6VAN0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atf6F6VAN0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Atf6F6VAN0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atf6F6VAN0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atf6F6VAN0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Atf6F6VAN0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atf6F6VAN0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atf6F6VAN0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atf6F6VAN0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Atf6F6VAN0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Atf6F6VAN0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atf6F6VAN0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atf6F6VAN0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.23■□□□□ 0.19
Atf6F6VAN0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atf6F6VAN0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Atf6F6VAN0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Atf6F6VAN0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atf6F6VAN0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Atf6F6VAN0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atf6F6VAN0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atf6F6VAN0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Atf6F6VAN0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Atf6F6VAN0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atf6F6VAN0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atf6F6VAN0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atf6F6VAN0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Atf6F6VAN0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atf6F6VAN0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atf6F6VAN0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Atf6F6VAN0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms