Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Mir5130-201ENSMUST00000175160 84 ntBASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 AC122351.1-201ENSMUST00000220467 126 ntBASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
C530025M09RikF6RGA8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Gm7889-201ENSMUST00000185591 958 ntBASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Gm37722-201ENSMUST00000193757 208 ntBASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
C530025M09RikF6RGA8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
C530025M09RikF6RGA8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
C530025M09RikF6RGA8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
C530025M09RikF6RGA8 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC10.4□□□□□ -0.74
C530025M09RikF6RGA8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
C530025M09RikF6RGA8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
C530025M09RikF6RGA8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
C530025M09RikF6RGA8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
C530025M09RikF6RGA8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
C530025M09RikF6RGA8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
C530025M09RikF6RGA8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms