Protein–RNA interactions for Protein: E9PZ54

Gcom1, GRINL1A complex locus, mousemouse

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcom1E9PZ54 Gm22240-201ENSMUST00000175225 82 ntBASIC17.36■□□□□ 0.37
Gcom1E9PZ54 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.36■□□□□ 0.37
Gcom1E9PZ54 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.36■□□□□ 0.37
Gcom1E9PZ54 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.36■□□□□ 0.37
Gcom1E9PZ54 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.36■□□□□ 0.37
Gcom1E9PZ54 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gcom1E9PZ54 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gcom1E9PZ54 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Gcom1E9PZ54 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gcom1E9PZ54 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gcom1E9PZ54 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Gcom1E9PZ54 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gcom1E9PZ54 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gcom1E9PZ54 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gcom1E9PZ54 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gcom1E9PZ54 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gcom1E9PZ54 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Gm18115-201ENSMUST00000221209 621 ntBASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gcom1E9PZ54 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.34■□□□□ 0.37
Gcom1E9PZ54 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gcom1E9PZ54 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gcom1E9PZ54 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gcom1E9PZ54 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gcom1E9PZ54 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gcom1E9PZ54 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.34■□□□□ 0.37
Gcom1E9PZ54 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gcom1E9PZ54 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gcom1E9PZ54 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.34■□□□□ 0.37
Gcom1E9PZ54 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.34■□□□□ 0.37
Gcom1E9PZ54 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gcom1E9PZ54 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gcom1E9PZ54 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gcom1E9PZ54 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gcom1E9PZ54 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gcom1E9PZ54 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Gcom1E9PZ54 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gcom1E9PZ54 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gcom1E9PZ54 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gcom1E9PZ54 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Gcom1E9PZ54 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Gcom1E9PZ54 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gcom1E9PZ54 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gcom1E9PZ54 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gcom1E9PZ54 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gcom1E9PZ54 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gcom1E9PZ54 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.33■□□□□ 0.37
Gcom1E9PZ54 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Gcom1E9PZ54 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.33■□□□□ 0.37
Gcom1E9PZ54 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gcom1E9PZ54 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Gm11539-201ENSMUST00000119837 557 ntBASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Gcom1E9PZ54 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gcom1E9PZ54 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gcom1E9PZ54 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gcom1E9PZ54 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gcom1E9PZ54 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms