Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a3E9PWQ3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.69■□□□□ 0.1
Col6a3E9PWQ3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a3E9PWQ3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a3E9PWQ3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a3E9PWQ3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.69■□□□□ 0.1
Col6a3E9PWQ3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Col6a3E9PWQ3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a3E9PWQ3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a3E9PWQ3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a3E9PWQ3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a3E9PWQ3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.69■□□□□ 0.1
Col6a3E9PWQ3 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Col6a3E9PWQ3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col6a3E9PWQ3 Snora78-201ENSMUST00000158630 128 ntBASIC15.69■□□□□ 0.1
Col6a3E9PWQ3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Col6a3E9PWQ3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Gm18246-201ENSMUST00000221023 728 ntBASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Gm4518-201ENSMUST00000182638 718 ntBASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Gm37714-201ENSMUST00000194742 342 ntBASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.68■□□□□ 0.1
Col6a3E9PWQ3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Gm10154-201ENSMUST00000084445 354 ntBASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Gm15678-201ENSMUST00000117573 960 ntBASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Col6a3E9PWQ3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.66■□□□□ 0.1
Col6a3E9PWQ3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Col6a3E9PWQ3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a3E9PWQ3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.66■□□□□ 0.1
Col6a3E9PWQ3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a3E9PWQ3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a3E9PWQ3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a3E9PWQ3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a3E9PWQ3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.66■□□□□ 0.1
Col6a3E9PWQ3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a3E9PWQ3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a3E9PWQ3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.66■□□□□ 0.1
Col6a3E9PWQ3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col6a3E9PWQ3 Gm9002-201ENSMUST00000178437 499 ntBASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col6a3E9PWQ3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms