Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Gm28043E0CXC2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm28043E0CXC2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Gm28043E0CXC2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Gm11336-201ENSMUST00000118168 334 ntBASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm28043E0CXC2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm28043E0CXC2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Gm28043E0CXC2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.88■□□□□ 0.13
Gm28043E0CXC2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Gm28043E0CXC2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Gm28043E0CXC2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Gm28043E0CXC2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Gm28043E0CXC2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm28043E0CXC2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.88■□□□□ 0.13
Gm28043E0CXC2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.88■□□□□ 0.13
Gm28043E0CXC2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Gm28043E0CXC2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm28043E0CXC2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm28043E0CXC2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms