Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syce3B5KM66 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syce3B5KM66 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Syce3B5KM66 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.16■□□□□ 0.5
Syce3B5KM66 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Syce3B5KM66 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syce3B5KM66 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syce3B5KM66 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Syce3B5KM66 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.16■□□□□ 0.5
Syce3B5KM66 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Syce3B5KM66 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syce3B5KM66 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Syce3B5KM66 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Syce3B5KM66 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.16■□□□□ 0.5
Syce3B5KM66 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syce3B5KM66 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syce3B5KM66 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syce3B5KM66 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syce3B5KM66 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syce3B5KM66 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syce3B5KM66 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syce3B5KM66 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.15■□□□□ 0.5
Syce3B5KM66 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Syce3B5KM66 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syce3B5KM66 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syce3B5KM66 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syce3B5KM66 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Syce3B5KM66 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Syce3B5KM66 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syce3B5KM66 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syce3B5KM66 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syce3B5KM66 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syce3B5KM66 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syce3B5KM66 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Syce3B5KM66 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Syce3B5KM66 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syce3B5KM66 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syce3B5KM66 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syce3B5KM66 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.14■□□□□ 0.49
Syce3B5KM66 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.14■□□□□ 0.49
Syce3B5KM66 Timm23-208ENSMUST00000226683 750 ntBASIC18.14■□□□□ 0.49
Syce3B5KM66 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Syce3B5KM66 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syce3B5KM66 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syce3B5KM66 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syce3B5KM66 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC18.14■□□□□ 0.49
Syce3B5KM66 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syce3B5KM66 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syce3B5KM66 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syce3B5KM66 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syce3B5KM66 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.14■□□□□ 0.49
Syce3B5KM66 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syce3B5KM66 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syce3B5KM66 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syce3B5KM66 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syce3B5KM66 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syce3B5KM66 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syce3B5KM66 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syce3B5KM66 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syce3B5KM66 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.13■□□□□ 0.49
Syce3B5KM66 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syce3B5KM66 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Syce3B5KM66 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syce3B5KM66 Mir1199-201ENSMUST00000117015 119 ntBASIC18.13■□□□□ 0.49
Syce3B5KM66 Gm11539-201ENSMUST00000119837 557 ntBASIC18.13■□□□□ 0.49
Syce3B5KM66 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Syce3B5KM66 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.13■□□□□ 0.49
Syce3B5KM66 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.13■□□□□ 0.49
Syce3B5KM66 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.13■□□□□ 0.49
Syce3B5KM66 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syce3B5KM66 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Syce3B5KM66 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syce3B5KM66 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syce3B5KM66 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Syce3B5KM66 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syce3B5KM66 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syce3B5KM66 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Syce3B5KM66 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Syce3B5KM66 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.12■□□□□ 0.49
Syce3B5KM66 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syce3B5KM66 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Syce3B5KM66 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syce3B5KM66 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Syce3B5KM66 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Syce3B5KM66 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Syce3B5KM66 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syce3B5KM66 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syce3B5KM66 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syce3B5KM66 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.12■□□□□ 0.49
Syce3B5KM66 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.12■□□□□ 0.49
Syce3B5KM66 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Syce3B5KM66 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Syce3B5KM66 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syce3B5KM66 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Syce3B5KM66 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.12■□□□□ 0.49
Syce3B5KM66 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Syce3B5KM66 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syce3B5KM66 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Syce3B5KM66 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Syce3B5KM66 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms