Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn7aB1AYL1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn7aB1AYL1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scn7aB1AYL1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn7aB1AYL1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC20.25■□□□□ 0.83
Scn7aB1AYL1 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
Scn7aB1AYL1 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC20.25■□□□□ 0.83
Scn7aB1AYL1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC20.25■□□□□ 0.83
Scn7aB1AYL1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn7aB1AYL1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC20.25■□□□□ 0.83
Scn7aB1AYL1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC20.25■□□□□ 0.83
Scn7aB1AYL1 CT009510.1-201ENSMUST00000227972 270 ntBASIC20.25■□□□□ 0.83
Scn7aB1AYL1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn7aB1AYL1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn7aB1AYL1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn7aB1AYL1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn7aB1AYL1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn7aB1AYL1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Scn7aB1AYL1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn7aB1AYL1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn7aB1AYL1 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn7aB1AYL1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC20.24■□□□□ 0.83
Scn7aB1AYL1 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Scn7aB1AYL1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scn7aB1AYL1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn7aB1AYL1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn7aB1AYL1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn7aB1AYL1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn7aB1AYL1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn7aB1AYL1 Gm6973-201ENSMUST00000117080 721 ntBASIC20.23■□□□□ 0.83
Scn7aB1AYL1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC20.23■□□□□ 0.83
Scn7aB1AYL1 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn7aB1AYL1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn7aB1AYL1 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC20.23■□□□□ 0.83
Scn7aB1AYL1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn7aB1AYL1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scn7aB1AYL1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn7aB1AYL1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scn7aB1AYL1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn7aB1AYL1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn7aB1AYL1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn7aB1AYL1 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn7aB1AYL1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn7aB1AYL1 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Gm14057-201ENSMUST00000120631 482 ntBASIC20.22■□□□□ 0.83
Scn7aB1AYL1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Gm7774-201ENSMUST00000200064 533 ntBASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Scn7aB1AYL1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn7aB1AYL1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scn7aB1AYL1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Scn7aB1AYL1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn7aB1AYL1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Scn7aB1AYL1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn7aB1AYL1 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Scn7aB1AYL1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC20.21■□□□□ 0.83
Scn7aB1AYL1 Gm2810-201ENSMUST00000118681 990 ntBASIC20.21■□□□□ 0.83
Scn7aB1AYL1 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scn7aB1AYL1 Gm2272-201ENSMUST00000194903 582 ntBASIC20.21■□□□□ 0.83
Scn7aB1AYL1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn7aB1AYL1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn7aB1AYL1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC20.21■□□□□ 0.83
Scn7aB1AYL1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn7aB1AYL1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn7aB1AYL1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scn7aB1AYL1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.21■□□□□ 0.83
Scn7aB1AYL1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.83
Scn7aB1AYL1 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Scn7aB1AYL1 Gm7336-201ENSMUST00000107041 1232 ntBASIC20.2■□□□□ 0.82
Scn7aB1AYL1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Scn7aB1AYL1 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC20.2■□□□□ 0.82
Scn7aB1AYL1 Mir7023-201ENSMUST00000185093 64 ntBASIC20.2■□□□□ 0.82
Scn7aB1AYL1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Scn7aB1AYL1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC20.2■□□□□ 0.82
Scn7aB1AYL1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn7aB1AYL1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC20.2■□□□□ 0.82
Scn7aB1AYL1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn7aB1AYL1 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn7aB1AYL1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC20.2■□□□□ 0.82
Scn7aB1AYL1 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms