Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Gm29541-201ENSMUST00000191351 678 ntBASIC16.14■□□□□ 0.18
Col4a6B1AVK5 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.14■□□□□ 0.18
Col4a6B1AVK5 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Col4a6B1AVK5 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.14■□□□□ 0.18
Col4a6B1AVK5 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Col4a6B1AVK5 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a6B1AVK5 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a6B1AVK5 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Col4a6B1AVK5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Col4a6B1AVK5 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a6B1AVK5 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.14■□□□□ 0.17
Col4a6B1AVK5 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a6B1AVK5 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a6B1AVK5 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a6B1AVK5 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.14■□□□□ 0.17
Col4a6B1AVK5 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a6B1AVK5 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a6B1AVK5 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a6B1AVK5 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.14■□□□□ 0.17
Col4a6B1AVK5 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col4a6B1AVK5 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col4a6B1AVK5 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a6B1AVK5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.12■□□□□ 0.17
Col4a6B1AVK5 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Col4a6B1AVK5 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a6B1AVK5 Gm2810-201ENSMUST00000118681 990 ntBASIC16.12■□□□□ 0.17
Col4a6B1AVK5 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a6B1AVK5 Gm27618-201ENSMUST00000183671 60 ntBASIC16.12■□□□□ 0.17
Col4a6B1AVK5 Gm5745-201ENSMUST00000183748 313 ntBASIC16.12■□□□□ 0.17
Col4a6B1AVK5 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a6B1AVK5 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.12■□□□□ 0.17
Col4a6B1AVK5 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a6B1AVK5 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a6B1AVK5 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a6B1AVK5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a6B1AVK5 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a6B1AVK5 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a6B1AVK5 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a6B1AVK5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a6B1AVK5 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a6B1AVK5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Col4a6B1AVK5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col4a6B1AVK5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Col4a6B1AVK5 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Col4a6B1AVK5 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Col4a6B1AVK5 Gm5779-201ENSMUST00000218467 910 ntBASIC16.11■□□□□ 0.17
Col4a6B1AVK5 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms