Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Gm17271-201ENSMUST00000165535 355 ntBASIC13.3□□□□□ -0.28
Col6a4A2AX52 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.3□□□□□ -0.28
Col6a4A2AX52 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.3□□□□□ -0.28
Col6a4A2AX52 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a4A2AX52 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.3□□□□□ -0.28
Col6a4A2AX52 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.3□□□□□ -0.28
Col6a4A2AX52 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.3□□□□□ -0.28
Col6a4A2AX52 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col6a4A2AX52 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Gm8344-201ENSMUST00000119813 856 ntBASIC13.29□□□□□ -0.28
Col6a4A2AX52 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Gm5177-201ENSMUST00000183092 997 ntBASIC13.29□□□□□ -0.28
Col6a4A2AX52 Gm43767-201ENSMUST00000198933 381 ntBASIC13.29□□□□□ -0.28
Col6a4A2AX52 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.29□□□□□ -0.28
Col6a4A2AX52 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.29□□□□□ -0.28
Col6a4A2AX52 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.29□□□□□ -0.28
Col6a4A2AX52 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Mir449b-201ENSMUST00000104833 80 ntBASIC13.29□□□□□ -0.28
Col6a4A2AX52 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Gm11424-201ENSMUST00000121929 829 ntBASIC13.29□□□□□ -0.28
Col6a4A2AX52 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.29□□□□□ -0.28
Col6a4A2AX52 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col6a4A2AX52 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col6a4A2AX52 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Mir6990-201ENSMUST00000183724 91 ntBASIC13.28□□□□□ -0.28
Col6a4A2AX52 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.28□□□□□ -0.28
Col6a4A2AX52 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.28□□□□□ -0.28
Col6a4A2AX52 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.28□□□□□ -0.28
Col6a4A2AX52 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col6a4A2AX52 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms