Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Mup-ps23-201ENSMUST00000118063 630 ntBASIC8.27□□□□□ -1.09
Ubr4A2AN08 Gm14660-201ENSMUST00000119809 575 ntBASIC8.27□□□□□ -1.09
Ubr4A2AN08 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Gm15678-201ENSMUST00000117573 960 ntBASIC8.27□□□□□ -1.09
Ubr4A2AN08 Gm13813-201ENSMUST00000120998 787 ntBASIC8.27□□□□□ -1.09
Ubr4A2AN08 Gm8801-201ENSMUST00000173255 1064 ntBASIC8.27□□□□□ -1.09
Ubr4A2AN08 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ubr4A2AN08 CT030657.3-201ENSMUST00000222707 1200 ntBASIC8.27□□□□□ -1.09
Ubr4A2AN08 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ubr4A2AN08 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC8.26□□□□□ -1.09
Ubr4A2AN08 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC8.26□□□□□ -1.09
Ubr4A2AN08 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC8.26□□□□□ -1.09
Ubr4A2AN08 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Gm18624-201ENSMUST00000220966 658 ntBASIC8.26□□□□□ -1.09
Ubr4A2AN08 Shd-206ENSMUST00000225145 998 ntBASIC8.26□□□□□ -1.09
Ubr4A2AN08 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC8.26□□□□□ -1.09
Ubr4A2AN08 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Gm27631-201ENSMUST00000184163 466 ntBASIC8.26□□□□□ -1.09
Ubr4A2AN08 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Ubr4A2AN08 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ubr4A2AN08 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Gm37194-201ENSMUST00000193092 3031 ntBASIC8.25□□□□□ -1.09
Ubr4A2AN08 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC8.25□□□□□ -1.09
Ubr4A2AN08 B9d1os-201ENSMUST00000137010 674 ntBASIC8.25□□□□□ -1.09
Ubr4A2AN08 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Gm8835-201ENSMUST00000173096 1169 ntBASIC8.25□□□□□ -1.09
Ubr4A2AN08 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC8.25□□□□□ -1.09
Ubr4A2AN08 CU024892.2-201ENSMUST00000224608 832 ntBASIC8.25□□□□□ -1.09
Ubr4A2AN08 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Gm6539-201ENSMUST00000119157 1064 ntBASIC8.25□□□□□ -1.09
Ubr4A2AN08 AC134335.2-201ENSMUST00000227660 440 ntBASIC8.25□□□□□ -1.09
Ubr4A2AN08 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC8.25□□□□□ -1.09
Ubr4A2AN08 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ubr4A2AN08 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ubr4A2AN08 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ubr4A2AN08 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ubr4A2AN08 Gm9002-201ENSMUST00000178437 499 ntBASIC8.24□□□□□ -1.09
Ubr4A2AN08 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms