Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gm34391-201ENSMUST00000203706 907 ntBASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gm12644-201ENSMUST00000119935 606 ntBASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gm28659-201ENSMUST00000188013 759 ntBASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Birc2-201ENSMUST00000054878 378 ntBASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms