Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3n-3A0A0G2JEM0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gm20049-201ENSMUST00000219950 730 ntBASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gm12441-201ENSMUST00000121806 588 ntBASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gm42473-201ENSMUST00000201056 2291 ntBASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gm15378-201ENSMUST00000121894 207 ntBASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gm43183-201ENSMUST00000200632 547 ntBASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gm9731-201ENSMUST00000209480 747 ntBASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms