Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.86□□□□□ -0.51
Trav19A0A0B4J1K4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Gm715-201ENSMUST00000117865 831 ntBASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Gm11336-201ENSMUST00000118168 334 ntBASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Gm13474-201ENSMUST00000122466 815 ntBASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav19A0A0B4J1K4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Slc35b2-207ENSMUST00000226086 850 ntBASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav19A0A0B4J1K4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Trav19A0A0B4J1K4 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Gm13168-201ENSMUST00000121771 632 ntBASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Gm21814-202ENSMUST00000203277 873 ntBASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms