Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
BC053393A0A0B4J1F6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
BC053393A0A0B4J1F6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
BC053393A0A0B4J1F6 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
BC053393A0A0B4J1F6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BC053393A0A0B4J1F6 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
BC053393A0A0B4J1F6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BC053393A0A0B4J1F6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BC053393A0A0B4J1F6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BC053393A0A0B4J1F6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
BC053393A0A0B4J1F6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BC053393A0A0B4J1F6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BC053393A0A0B4J1F6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BC053393A0A0B4J1F6 Gm10252-201ENSMUST00000209541 832 ntBASIC12.68□□□□□ -0.38
BC053393A0A0B4J1F6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
BC053393A0A0B4J1F6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BC053393A0A0B4J1F6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.68□□□□□ -0.38
BC053393A0A0B4J1F6 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
BC053393A0A0B4J1F6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BC053393A0A0B4J1F6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BC053393A0A0B4J1F6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.68□□□□□ -0.38
BC053393A0A0B4J1F6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
BC053393A0A0B4J1F6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Gm15565-201ENSMUST00000118890 427 ntBASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Gm13559-201ENSMUST00000120476 863 ntBASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Gm10566-201ENSMUST00000086739 996 ntBASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 BC037039-201ENSMUST00000192003 2205 ntBASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BC053393A0A0B4J1F6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Gm43799-201ENSMUST00000201845 579 ntBASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
BC053393A0A0B4J1F6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms