Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trbc1A0A0A6YWV4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbc1A0A0A6YWV4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbc1A0A0A6YWV4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbc1A0A0A6YWV4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trbc1A0A0A6YWV4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.54□□□□□ -0.08
Trbc1A0A0A6YWV4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbc1A0A0A6YWV4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.54□□□□□ -0.08
Trbc1A0A0A6YWV4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbc1A0A0A6YWV4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbc1A0A0A6YWV4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbc1A0A0A6YWV4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.54□□□□□ -0.08
Trbc1A0A0A6YWV4 Gm15165-201ENSMUST00000118140 502 ntBASIC14.54□□□□□ -0.08
Trbc1A0A0A6YWV4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbc1A0A0A6YWV4 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.54□□□□□ -0.08
Trbc1A0A0A6YWV4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbc1A0A0A6YWV4 Asic1-205ENSMUST00000228185 1818 ntBASIC14.54□□□□□ -0.08
Trbc1A0A0A6YWV4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.54□□□□□ -0.08
Trbc1A0A0A6YWV4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbc1A0A0A6YWV4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbc1A0A0A6YWV4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbc1A0A0A6YWV4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Prob1-201ENSMUST00000097619 3021 ntBASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbc1A0A0A6YWV4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbc1A0A0A6YWV4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbc1A0A0A6YWV4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbc1A0A0A6YWV4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbc1A0A0A6YWV4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbc1A0A0A6YWV4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbc1A0A0A6YWV4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbc1A0A0A6YWV4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trbc1A0A0A6YWV4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbc1A0A0A6YWV4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbc1A0A0A6YWV4 Gm7153-201ENSMUST00000117092 455 ntBASIC14.52□□□□□ -0.09
Trbc1A0A0A6YWV4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.52□□□□□ -0.09
Trbc1A0A0A6YWV4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms