Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-4A0A075B6B4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Gm15165-201ENSMUST00000118140 502 ntBASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Gm15372-201ENSMUST00000120729 834 ntBASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Gm12895-201ENSMUST00000122214 226 ntBASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav6-4A0A075B6B4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-4A0A075B6B4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Gm9103-201ENSMUST00000119371 405 ntBASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-4A0A075B6B4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms