Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6n-6A0A075B6B2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Trav6n-6A0A075B6B2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Trav6n-6A0A075B6B2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm7791-201ENSMUST00000219066 539 ntBASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6n-6A0A075B6B2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 App-207ENSMUST00000227737 2827 ntBASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm6433-201ENSMUST00000118634 875 ntBASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm16061-201ENSMUST00000122167 857 ntBASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm18958-201ENSMUST00000174258 762 ntBASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6n-6A0A075B6B2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6n-6A0A075B6B2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms