Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-7A0A075B6B0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-7A0A075B6B0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-7A0A075B6B0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-7A0A075B6B0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-7A0A075B6B0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Trav6d-7A0A075B6B0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Gm6623-201ENSMUST00000173570 544 ntBASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Gm27704-201ENSMUST00000185094 107 ntBASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Actl10-202ENSMUST00000226583 1501 ntBASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-7A0A075B6B0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Gm29518-201ENSMUST00000190858 372 ntBASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-7A0A075B6B0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 Gm17808-201ENSMUST00000200859 894 ntBASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
Trav6d-7A0A075B6B0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms