Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav9d-1A0A075B699 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Mir6982-201ENSMUST00000184354 68 ntBASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Gm21559-201ENSMUST00000220638 855 ntBASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Gm8587-201ENSMUST00000076538 843 ntBASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-1A0A075B699 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Gm22697-201ENSMUST00000175194 63 ntBASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-1A0A075B699 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-1A0A075B699 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav9d-1A0A075B699 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav9d-1A0A075B699 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-1A0A075B699 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-1A0A075B699 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-1A0A075B699 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-1A0A075B699 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-1A0A075B699 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-1A0A075B699 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-1A0A075B699 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms