Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav18A0A075B656 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.99□□□□□ -0.33
Trav18A0A075B656 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav18A0A075B656 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Gm11355-201ENSMUST00000121120 306 ntBASIC12.99□□□□□ -0.33
Trav18A0A075B656 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav18A0A075B656 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.99□□□□□ -0.33
Trav18A0A075B656 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav18A0A075B656 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.98□□□□□ -0.33
Trav18A0A075B656 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.98□□□□□ -0.33
Trav18A0A075B656 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav18A0A075B656 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav18A0A075B656 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav18A0A075B656 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav18A0A075B656 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav18A0A075B656 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.98□□□□□ -0.33
Trav18A0A075B656 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Asic1-205ENSMUST00000228185 1818 ntBASIC12.97□□□□□ -0.33
Trav18A0A075B656 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav18A0A075B656 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav18A0A075B656 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.97□□□□□ -0.33
Trav18A0A075B656 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.97□□□□□ -0.33
Trav18A0A075B656 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Mir6982-201ENSMUST00000184354 68 ntBASIC12.97□□□□□ -0.33
Trav18A0A075B656 Gm44430-201ENSMUST00000203376 995 ntBASIC12.97□□□□□ -0.33
Trav18A0A075B656 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav18A0A075B656 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav18A0A075B656 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms