Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 AL590614.2-201ENSMUST00000225374 1937 ntBASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Gm29241-201ENSMUST00000189260 1096 ntBASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-4A0A075B654 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Gm2399-201ENSMUST00000104944 225 ntBASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Cdc34b-202ENSMUST00000188741 1252 ntBASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 AC140930.3-201ENSMUST00000222935 274 ntBASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-4A0A075B654 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC10.67□□□□□ -0.7
Trav3-4A0A075B654 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms