Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16A0A075B653 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav16A0A075B653 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16A0A075B653 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16A0A075B653 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16A0A075B653 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16A0A075B653 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav16A0A075B653 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Gm7791-201ENSMUST00000219066 539 ntBASIC12.26□□□□□ -0.45
Trav16A0A075B653 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav16A0A075B653 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16A0A075B653 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16A0A075B653 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.25□□□□□ -0.45
Trav16A0A075B653 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16A0A075B653 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Gm13186-201ENSMUST00000118031 316 ntBASIC12.24□□□□□ -0.45
Trav16A0A075B653 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16A0A075B653 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16A0A075B653 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms