Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-2A0A075B638 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Gm29707-201ENSMUST00000196325 491 ntBASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-2A0A075B638 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-2A0A075B638 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4-2A0A075B638 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms