Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav16nA0A075B634 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12□□□□□ -0.49
Trav16nA0A075B634 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12□□□□□ -0.49
Trav16nA0A075B634 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 Gm10698-201ENSMUST00000182663 604 ntBASIC12□□□□□ -0.49
Trav16nA0A075B634 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12□□□□□ -0.49
Trav16nA0A075B634 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 Timm23-208ENSMUST00000226683 750 ntBASIC12□□□□□ -0.49
Trav16nA0A075B634 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav16nA0A075B634 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav16nA0A075B634 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav16nA0A075B634 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 Gm38058-201ENSMUST00000194323 4368 ntBASIC12□□□□□ -0.49
Trav16nA0A075B634 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav16nA0A075B634 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav16nA0A075B634 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Gm32996-201ENSMUST00000199828 1447 ntBASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16nA0A075B634 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16nA0A075B634 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16nA0A075B634 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16nA0A075B634 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16nA0A075B634 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16nA0A075B634 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16nA0A075B634 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16nA0A075B634 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16nA0A075B634 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16nA0A075B634 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16nA0A075B634 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16nA0A075B634 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16nA0A075B634 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16nA0A075B634 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16nA0A075B634 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16nA0A075B634 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16nA0A075B634 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16nA0A075B634 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16nA0A075B634 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Trav16nA0A075B634 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16nA0A075B634 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms