Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav9n-4A0A075B631 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Gm42473-201ENSMUST00000201056 2291 ntBASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav9n-4A0A075B631 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC10.83□□□□□ -0.67
Trav9n-4A0A075B631 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav9n-4A0A075B631 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
Trav9n-4A0A075B631 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms