Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav16d-dv11A0A075B617 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Gm11249-201ENSMUST00000117071 859 ntBASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav16d-dv11A0A075B617 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Gm5874-201ENSMUST00000096101 508 ntBASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav16d-dv11A0A075B617 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav16d-dv11A0A075B617 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.65□□□□□ -0.55
Trav16d-dv11A0A075B617 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav16d-dv11A0A075B617 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav16d-dv11A0A075B617 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Trav16d-dv11A0A075B617 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav16d-dv11A0A075B617 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav16d-dv11A0A075B617 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav16d-dv11A0A075B617 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms