Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.87■□□□□ 0.13
H2afb2S4R1M3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb2S4R1M3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.87■□□□□ 0.13
H2afb2S4R1M3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.87■□□□□ 0.13
H2afb2S4R1M3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
H2afb2S4R1M3 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb2S4R1M3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb2S4R1M3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
H2afb2S4R1M3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Rprl3-201ENSMUST00000157400 290 ntBASIC15.86■□□□□ 0.13
H2afb2S4R1M3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.86■□□□□ 0.13
H2afb2S4R1M3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
H2afb2S4R1M3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Gm6257-201ENSMUST00000163864 910 ntBASIC15.85■□□□□ 0.13
H2afb2S4R1M3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Mir3081-201ENSMUST00000175305 84 ntBASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Gm33142-201ENSMUST00000193913 867 ntBASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afb2S4R1M3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afb2S4R1M3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.83■□□□□ 0.13
H2afb2S4R1M3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.83■□□□□ 0.13
H2afb2S4R1M3 App-207ENSMUST00000227737 2827 ntBASIC15.83■□□□□ 0.13
H2afb2S4R1M3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
H2afb2S4R1M3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms