Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Gm22697-201ENSMUST00000175194 63 ntBASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H2afb3S4R1G7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Gm37722-201ENSMUST00000193757 208 ntBASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H2afb3S4R1G7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afb3S4R1G7 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.27□□□□□ -0.12
H2afb3S4R1G7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
H2afb3S4R1G7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.27□□□□□ -0.12
H2afb3S4R1G7 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afb3S4R1G7 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
H2afb3S4R1G7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
H2afb3S4R1G7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afb3S4R1G7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
H2afb3S4R1G7 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
H2afb3S4R1G7 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
H2afb3S4R1G7 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
H2afb3S4R1G7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb3S4R1G7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
H2afb3S4R1G7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb3S4R1G7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
H2afb3S4R1G7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
H2afb3S4R1G7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.27□□□□□ -0.13
H2afb3S4R1G7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb3S4R1G7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb3S4R1G7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb3S4R1G7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb3S4R1G7 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb3S4R1G7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb3S4R1G7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb3S4R1G7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
H2afb3S4R1G7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
H2afb3S4R1G7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Gm15565-201ENSMUST00000118890 427 ntBASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Gm10052-201ENSMUST00000168019 960 ntBASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Gm7729-201ENSMUST00000050143 801 ntBASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afb3S4R1G7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms