Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb1S4R1E0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Gm45058-201ENSMUST00000205810 766 ntBASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb1S4R1E0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 Gm27389-201ENSMUST00000183622 195 ntBASIC14.39□□□□□ -0.11
H2afb1S4R1E0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.39□□□□□ -0.11
H2afb1S4R1E0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.39□□□□□ -0.11
H2afb1S4R1E0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
H2afb1S4R1E0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.38□□□□□ -0.11
H2afb1S4R1E0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms