Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nr1h3Q9Z0Y9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm9727-201ENSMUST00000161387 555 ntBASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nr1h3Q9Z0Y9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Nr1h3Q9Z0Y9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nr1h3Q9Z0Y9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nr1h3Q9Z0Y9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nr1h3Q9Z0Y9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nr1h3Q9Z0Y9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nr1h3Q9Z0Y9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Nr1h3Q9Z0Y9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nr1h3Q9Z0Y9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nr1h3Q9Z0Y9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Nr1h3Q9Z0Y9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.17■□□□□ 0.34
Nr1h3Q9Z0Y9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.17■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.17■□□□□ 0.34
Nr1h3Q9Z0Y9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.17■□□□□ 0.34
Nr1h3Q9Z0Y9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nr1h3Q9Z0Y9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nr1h3Q9Z0Y9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nr1h3Q9Z0Y9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nr1h3Q9Z0Y9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nr1h3Q9Z0Y9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nr1h3Q9Z0Y9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Nr1h3Q9Z0Y9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm8825-201ENSMUST00000182565 998 ntBASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm4518-201ENSMUST00000182638 718 ntBASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm27702-201ENSMUST00000184512 56 ntBASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nr1h3Q9Z0Y9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms