Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip2Q9Z0H8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip2Q9Z0H8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clip2Q9Z0H8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip2Q9Z0H8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip2Q9Z0H8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip2Q9Z0H8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.4■□□□□ 0.54
Clip2Q9Z0H8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Clip2Q9Z0H8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.4■□□□□ 0.54
Clip2Q9Z0H8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Clip2Q9Z0H8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip2Q9Z0H8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Clip2Q9Z0H8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
Clip2Q9Z0H8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip2Q9Z0H8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip2Q9Z0H8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clip2Q9Z0H8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip2Q9Z0H8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.4■□□□□ 0.54
Clip2Q9Z0H8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip2Q9Z0H8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip2Q9Z0H8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip2Q9Z0H8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Clip2Q9Z0H8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
Clip2Q9Z0H8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Clip2Q9Z0H8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Clip2Q9Z0H8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Clip2Q9Z0H8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Clip2Q9Z0H8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Clip2Q9Z0H8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clip2Q9Z0H8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Gm12350-201ENSMUST00000121208 462 ntBASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip2Q9Z0H8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Gm6443-201ENSMUST00000203599 874 ntBASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip2Q9Z0H8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms