Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
Phtf1Q9QZ09 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Phtf1Q9QZ09 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Phtf1Q9QZ09 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Phtf1Q9QZ09 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.39■□□□□ 0.37
Phtf1Q9QZ09 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Phtf1Q9QZ09 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Phtf1Q9QZ09 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Phtf1Q9QZ09 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Phtf1Q9QZ09 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Phtf1Q9QZ09 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Phtf1Q9QZ09 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Phtf1Q9QZ09 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Phtf1Q9QZ09 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Phtf1Q9QZ09 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Phtf1Q9QZ09 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Phtf1Q9QZ09 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Phtf1Q9QZ09 Gm13418-201ENSMUST00000119097 944 ntBASIC17.38■□□□□ 0.37
Phtf1Q9QZ09 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.38■□□□□ 0.37
Phtf1Q9QZ09 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Phtf1Q9QZ09 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.38■□□□□ 0.37
Phtf1Q9QZ09 Rps4l-201ENSMUST00000071745 943 ntBASIC17.38■□□□□ 0.37
Phtf1Q9QZ09 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Phtf1Q9QZ09 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Phtf1Q9QZ09 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Phtf1Q9QZ09 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Phtf1Q9QZ09 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Phtf1Q9QZ09 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Phtf1Q9QZ09 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
Phtf1Q9QZ09 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Phtf1Q9QZ09 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Phtf1Q9QZ09 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Phtf1Q9QZ09 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Phtf1Q9QZ09 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Phtf1Q9QZ09 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.37■□□□□ 0.37
Phtf1Q9QZ09 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.37■□□□□ 0.37
Phtf1Q9QZ09 Gm4535-201ENSMUST00000182274 558 ntBASIC17.37■□□□□ 0.37
Phtf1Q9QZ09 Mir8098-201ENSMUST00000184011 137 ntBASIC17.37■□□□□ 0.37
Phtf1Q9QZ09 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.37■□□□□ 0.37
Phtf1Q9QZ09 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Phtf1Q9QZ09 Gm10355-201ENSMUST00000097146 517 ntBASIC17.37■□□□□ 0.37
Phtf1Q9QZ09 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Phtf1Q9QZ09 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.37■□□□□ 0.37
Phtf1Q9QZ09 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Phtf1Q9QZ09 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Phtf1Q9QZ09 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Phtf1Q9QZ09 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.37■□□□□ 0.37
Phtf1Q9QZ09 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Gm7862-201ENSMUST00000121461 292 ntBASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Gm6376-201ENSMUST00000209407 580 ntBASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Phtf1Q9QZ09 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Gm28659-201ENSMUST00000188013 759 ntBASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Gm7461-201ENSMUST00000058918 827 ntBASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.35■□□□□ 0.37
Phtf1Q9QZ09 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms