Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sec61a2Q9JLR1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sec61a2Q9JLR1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Sec61a2Q9JLR1 Sybu-209ENSMUST00000228639 4113 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms