Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfx5Q9JL61 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rfx5Q9JL61 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfx5Q9JL61 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rfx5Q9JL61 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rfx5Q9JL61 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx5Q9JL61 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx5Q9JL61 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Rfx5Q9JL61 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx5Q9JL61 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rfx5Q9JL61 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx5Q9JL61 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx5Q9JL61 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx5Q9JL61 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx5Q9JL61 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.72■□□□□ 0.27
Rfx5Q9JL61 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rfx5Q9JL61 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx5Q9JL61 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx5Q9JL61 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx5Q9JL61 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rfx5Q9JL61 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx5Q9JL61 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx5Q9JL61 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx5Q9JL61 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx5Q9JL61 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.71■□□□□ 0.27
Rfx5Q9JL61 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx5Q9JL61 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx5Q9JL61 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx5Q9JL61 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx5Q9JL61 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx5Q9JL61 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Rfx5Q9JL61 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.71■□□□□ 0.27
Rfx5Q9JL61 Gm27646-201ENSMUST00000183989 110 ntBASIC16.71■□□□□ 0.27
Rfx5Q9JL61 Gm6089-201ENSMUST00000197666 938 ntBASIC16.71■□□□□ 0.27
Rfx5Q9JL61 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.71■□□□□ 0.27
Rfx5Q9JL61 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.71■□□□□ 0.27
Rfx5Q9JL61 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx5Q9JL61 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx5Q9JL61 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx5Q9JL61 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx5Q9JL61 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx5Q9JL61 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rfx5Q9JL61 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.71■□□□□ 0.26
Rfx5Q9JL61 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.7■□□□□ 0.26
Rfx5Q9JL61 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx5Q9JL61 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx5Q9JL61 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rfx5Q9JL61 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx5Q9JL61 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.7■□□□□ 0.26
Rfx5Q9JL61 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.7■□□□□ 0.26
Rfx5Q9JL61 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx5Q9JL61 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rfx5Q9JL61 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx5Q9JL61 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx5Q9JL61 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.7■□□□□ 0.26
Rfx5Q9JL61 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx5Q9JL61 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.7■□□□□ 0.26
Rfx5Q9JL61 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx5Q9JL61 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx5Q9JL61 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx5Q9JL61 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx5Q9JL61 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx5Q9JL61 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx5Q9JL61 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx5Q9JL61 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx5Q9JL61 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx5Q9JL61 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx5Q9JL61 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx5Q9JL61 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx5Q9JL61 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Rfx5Q9JL61 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx5Q9JL61 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Rfx5Q9JL61 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.69■□□□□ 0.26
Rfx5Q9JL61 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.69■□□□□ 0.26
Rfx5Q9JL61 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx5Q9JL61 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx5Q9JL61 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.69■□□□□ 0.26
Rfx5Q9JL61 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx5Q9JL61 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.69■□□□□ 0.26
Rfx5Q9JL61 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Rfx5Q9JL61 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx5Q9JL61 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx5Q9JL61 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rfx5Q9JL61 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rfx5Q9JL61 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Rfx5Q9JL61 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.68■□□□□ 0.26
Rfx5Q9JL61 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx5Q9JL61 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Rfx5Q9JL61 App-207ENSMUST00000227737 2827 ntBASIC16.68■□□□□ 0.26
Rfx5Q9JL61 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx5Q9JL61 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.68■□□□□ 0.26
Rfx5Q9JL61 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx5Q9JL61 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx5Q9JL61 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx5Q9JL61 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx5Q9JL61 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rfx5Q9JL61 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx5Q9JL61 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx5Q9JL61 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx5Q9JL61 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms