Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Rpf2Q9JJ80 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Rpf2Q9JJ80 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rpf2Q9JJ80 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpf2Q9JJ80 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpf2Q9JJ80 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpf2Q9JJ80 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpf2Q9JJ80 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpf2Q9JJ80 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rpf2Q9JJ80 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpf2Q9JJ80 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpf2Q9JJ80 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpf2Q9JJ80 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Gm10052-201ENSMUST00000168019 960 ntBASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Mir6404-201ENSMUST00000183699 94 ntBASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Gm45058-201ENSMUST00000205810 766 ntBASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Gm7729-201ENSMUST00000050143 801 ntBASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpf2Q9JJ80 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpf2Q9JJ80 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rpf2Q9JJ80 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpf2Q9JJ80 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpf2Q9JJ80 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpf2Q9JJ80 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
Rpf2Q9JJ80 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpf2Q9JJ80 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.84■□□□□ 0.29
Rpf2Q9JJ80 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.84■□□□□ 0.29
Rpf2Q9JJ80 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpf2Q9JJ80 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpf2Q9JJ80 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpf2Q9JJ80 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rpf2Q9JJ80 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rpf2Q9JJ80 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpf2Q9JJ80 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpf2Q9JJ80 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpf2Q9JJ80 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rpf2Q9JJ80 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rpf2Q9JJ80 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rpf2Q9JJ80 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rpf2Q9JJ80 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Rpf2Q9JJ80 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.83■□□□□ 0.28
Rpf2Q9JJ80 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpf2Q9JJ80 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpf2Q9JJ80 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpf2Q9JJ80 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rpf2Q9JJ80 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rpf2Q9JJ80 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.83■□□□□ 0.28
Rpf2Q9JJ80 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Rpf2Q9JJ80 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms