Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn3Q9ES97 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rtn3Q9ES97 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn3Q9ES97 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rtn3Q9ES97 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn3Q9ES97 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn3Q9ES97 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn3Q9ES97 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.9■□□□□ 0.3
Rtn3Q9ES97 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Rtn3Q9ES97 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.89■□□□□ 0.3
Rtn3Q9ES97 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Rtn3Q9ES97 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Rtn3Q9ES97 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtn3Q9ES97 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rtn3Q9ES97 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtn3Q9ES97 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.89■□□□□ 0.29
Rtn3Q9ES97 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtn3Q9ES97 Gm15794-201ENSMUST00000120182 631 ntBASIC16.89■□□□□ 0.29
Rtn3Q9ES97 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.89■□□□□ 0.29
Rtn3Q9ES97 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.89■□□□□ 0.29
Rtn3Q9ES97 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtn3Q9ES97 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.89■□□□□ 0.29
Rtn3Q9ES97 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.89■□□□□ 0.29
Rtn3Q9ES97 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtn3Q9ES97 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rtn3Q9ES97 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtn3Q9ES97 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Gm7153-201ENSMUST00000117092 455 ntBASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn3Q9ES97 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Olfr129-201ENSMUST00000122318 993 ntBASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 App-207ENSMUST00000227737 2827 ntBASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
Rtn3Q9ES97 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Rtn3Q9ES97 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms