Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Rprl3-201ENSMUST00000157400 290 ntBASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdc40Q9DC48 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cdc40Q9DC48 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Cdc40Q9DC48 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdc40Q9DC48 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cdc40Q9DC48 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.71□□□□□ -0.05
Cdc40Q9DC48 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Cdc40Q9DC48 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdc40Q9DC48 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdc40Q9DC48 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdc40Q9DC48 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cdc40Q9DC48 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.71□□□□□ -0.05
Cdc40Q9DC48 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdc40Q9DC48 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cdc40Q9DC48 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cdc40Q9DC48 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdc40Q9DC48 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Cdc40Q9DC48 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdc40Q9DC48 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.71□□□□□ -0.05
Cdc40Q9DC48 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdc40Q9DC48 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.71□□□□□ -0.06
Cdc40Q9DC48 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Cdc40Q9DC48 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdc40Q9DC48 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdc40Q9DC48 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 Gm44430-201ENSMUST00000203376 995 ntBASIC14.7□□□□□ -0.06
Cdc40Q9DC48 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Cdc40Q9DC48 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Gm27867-201ENSMUST00000184778 125 ntBASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Cdc40Q9DC48 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms