Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rsph3bQ9DA80 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.36■□□□□ 0.37
Rsph3bQ9DA80 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rsph3bQ9DA80 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rsph3bQ9DA80 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rsph3bQ9DA80 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rsph3bQ9DA80 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rsph3bQ9DA80 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rsph3bQ9DA80 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rsph3bQ9DA80 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rsph3bQ9DA80 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Gm7222-201ENSMUST00000117512 906 ntBASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Gm5867-201ENSMUST00000063197 592 ntBASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.35■□□□□ 0.37
Rsph3bQ9DA80 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rsph3bQ9DA80 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rsph3bQ9DA80 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rsph3bQ9DA80 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rsph3bQ9DA80 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Rsph3bQ9DA80 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Rsph3bQ9DA80 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rsph3bQ9DA80 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rsph3bQ9DA80 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rsph3bQ9DA80 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.33■□□□□ 0.36
Rsph3bQ9DA80 Gm8000-201ENSMUST00000188378 592 ntBASIC17.33■□□□□ 0.36
Rsph3bQ9DA80 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rsph3bQ9DA80 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.33■□□□□ 0.36
Rsph3bQ9DA80 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.33■□□□□ 0.36
Rsph3bQ9DA80 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.33■□□□□ 0.36
Rsph3bQ9DA80 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rsph3bQ9DA80 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rsph3bQ9DA80 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rsph3bQ9DA80 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rsph3bQ9DA80 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rsph3bQ9DA80 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rsph3bQ9DA80 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rsph3bQ9DA80 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.32■□□□□ 0.36
Rsph3bQ9DA80 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.32■□□□□ 0.36
Rsph3bQ9DA80 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rsph3bQ9DA80 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.32■□□□□ 0.36
Rsph3bQ9DA80 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.32■□□□□ 0.36
Rsph3bQ9DA80 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rsph3bQ9DA80 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.32■□□□□ 0.36
Rsph3bQ9DA80 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rsph3bQ9DA80 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.32■□□□□ 0.36
Rsph3bQ9DA80 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rsph3bQ9DA80 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.32■□□□□ 0.36
Rsph3bQ9DA80 Psmb5-202ENSMUST00000227257 622 ntBASIC17.32■□□□□ 0.36
Rsph3bQ9DA80 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rsph3bQ9DA80 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rsph3bQ9DA80 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rsph3bQ9DA80 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rsph3bQ9DA80 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rsph3bQ9DA80 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms