Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp5Q9D7S9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp5Q9D7S9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp5Q9D7S9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp5Q9D7S9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp5Q9D7S9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.87■□□□□ 0.77
Chmp5Q9D7S9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp5Q9D7S9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp5Q9D7S9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp5Q9D7S9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Chmp5Q9D7S9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp5Q9D7S9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Gm13436-201ENSMUST00000120418 567 ntBASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Gm22240-201ENSMUST00000175225 82 ntBASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Mir1668-201ENSMUST00000184114 107 ntBASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Chmp5Q9D7S9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Chmp5Q9D7S9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp5Q9D7S9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp5Q9D7S9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp5Q9D7S9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp5Q9D7S9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp5Q9D7S9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp5Q9D7S9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC19.83■□□□□ 0.77
Chmp5Q9D7S9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp5Q9D7S9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Chmp5Q9D7S9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms