Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cfap53Q9D439 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cfap53Q9D439 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cfap53Q9D439 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cfap53Q9D439 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cfap53Q9D439 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.42■□□□□ 0.38
Cfap53Q9D439 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cfap53Q9D439 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cfap53Q9D439 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap53Q9D439 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap53Q9D439 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Gm27704-201ENSMUST00000185094 107 ntBASIC17.41■□□□□ 0.38
Cfap53Q9D439 Gm7977-201ENSMUST00000193787 748 ntBASIC17.41■□□□□ 0.38
Cfap53Q9D439 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap53Q9D439 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap53Q9D439 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap53Q9D439 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap53Q9D439 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap53Q9D439 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.4■□□□□ 0.38
Cfap53Q9D439 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap53Q9D439 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.4■□□□□ 0.38
Cfap53Q9D439 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap53Q9D439 Gm13312-201ENSMUST00000119631 718 ntBASIC17.4■□□□□ 0.38
Cfap53Q9D439 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap53Q9D439 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cfap53Q9D439 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap53Q9D439 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.4■□□□□ 0.38
Cfap53Q9D439 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.4■□□□□ 0.38
Cfap53Q9D439 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap53Q9D439 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap53Q9D439 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cfap53Q9D439 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap53Q9D439 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cfap53Q9D439 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap53Q9D439 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.4■□□□□ 0.38
Cfap53Q9D439 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.4■□□□□ 0.38
Cfap53Q9D439 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Cfap53Q9D439 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cfap53Q9D439 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Cfap53Q9D439 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap53Q9D439 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap53Q9D439 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap53Q9D439 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.39■□□□□ 0.37
Cfap53Q9D439 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.39■□□□□ 0.37
Cfap53Q9D439 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap53Q9D439 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap53Q9D439 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap53Q9D439 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.39■□□□□ 0.37
Cfap53Q9D439 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cfap53Q9D439 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap53Q9D439 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cfap53Q9D439 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap53Q9D439 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap53Q9D439 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap53Q9D439 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap53Q9D439 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap53Q9D439 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap53Q9D439 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap53Q9D439 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap53Q9D439 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap53Q9D439 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cfap53Q9D439 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap53Q9D439 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap53Q9D439 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.38■□□□□ 0.37
Cfap53Q9D439 Rprl3-201ENSMUST00000157400 290 ntBASIC17.38■□□□□ 0.37
Cfap53Q9D439 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.38■□□□□ 0.37
Cfap53Q9D439 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap53Q9D439 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Cfap53Q9D439 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap53Q9D439 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Cfap53Q9D439 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap53Q9D439 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap53Q9D439 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap53Q9D439 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap53Q9D439 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap53Q9D439 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cfap53Q9D439 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap53Q9D439 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap53Q9D439 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms