Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
5530400C23RikQ9D3I0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
5530400C23RikQ9D3I0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
5530400C23RikQ9D3I0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
5530400C23RikQ9D3I0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
5530400C23RikQ9D3I0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
5530400C23RikQ9D3I0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
5530400C23RikQ9D3I0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
5530400C23RikQ9D3I0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
5530400C23RikQ9D3I0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
5530400C23RikQ9D3I0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
5530400C23RikQ9D3I0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
5530400C23RikQ9D3I0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
5530400C23RikQ9D3I0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
5530400C23RikQ9D3I0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
5530400C23RikQ9D3I0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Mir6404-201ENSMUST00000183699 94 ntBASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Gm17807-201ENSMUST00000186869 298 ntBASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
5530400C23RikQ9D3I0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Gm27357-201ENSMUST00000183754 135 ntBASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
5530400C23RikQ9D3I0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms