Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.85■□□□□ 0.61
Stag1Q9D3E6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Stag1Q9D3E6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Stag1Q9D3E6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stag1Q9D3E6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stag1Q9D3E6 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.84■□□□□ 0.61
Stag1Q9D3E6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.84■□□□□ 0.61
Stag1Q9D3E6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Stag1Q9D3E6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Stag1Q9D3E6 Gm37153-201ENSMUST00000193637 231 ntBASIC18.84■□□□□ 0.61
Stag1Q9D3E6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.84■□□□□ 0.61
Stag1Q9D3E6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.84■□□□□ 0.61
Stag1Q9D3E6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stag1Q9D3E6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stag1Q9D3E6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stag1Q9D3E6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stag1Q9D3E6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Stag1Q9D3E6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stag1Q9D3E6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Stag1Q9D3E6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Stag1Q9D3E6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stag1Q9D3E6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Stag1Q9D3E6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stag1Q9D3E6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stag1Q9D3E6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Stag1Q9D3E6 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.83■□□□□ 0.61
Stag1Q9D3E6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Stag1Q9D3E6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.83■□□□□ 0.61
Stag1Q9D3E6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.83■□□□□ 0.61
Stag1Q9D3E6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Stag1Q9D3E6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.83■□□□□ 0.61
Stag1Q9D3E6 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Stag1Q9D3E6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Stag1Q9D3E6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Stag1Q9D3E6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Stag1Q9D3E6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Stag1Q9D3E6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Stag1Q9D3E6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Stag1Q9D3E6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Stag1Q9D3E6 Gm6257-201ENSMUST00000163864 910 ntBASIC18.83■□□□□ 0.6
Stag1Q9D3E6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.83■□□□□ 0.6
Stag1Q9D3E6 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.83■□□□□ 0.6
Stag1Q9D3E6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Stag1Q9D3E6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Stag1Q9D3E6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Stag1Q9D3E6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Stag1Q9D3E6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Stag1Q9D3E6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Stag1Q9D3E6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Stag1Q9D3E6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Gm24513-201ENSMUST00000174964 138 ntBASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Gm27397-201ENSMUST00000184997 107 ntBASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.82■□□□□ 0.6
Stag1Q9D3E6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stag1Q9D3E6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Stag1Q9D3E6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Stag1Q9D3E6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Stag1Q9D3E6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stag1Q9D3E6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.81■□□□□ 0.6
Stag1Q9D3E6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Stag1Q9D3E6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Stag1Q9D3E6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Stag1Q9D3E6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stag1Q9D3E6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stag1Q9D3E6 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.81■□□□□ 0.6
Stag1Q9D3E6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Stag1Q9D3E6 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stag1Q9D3E6 Gm10175-201ENSMUST00000086013 645 ntBASIC18.81■□□□□ 0.6
Stag1Q9D3E6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Stag1Q9D3E6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.81■□□□□ 0.6
Stag1Q9D3E6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Stag1Q9D3E6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stag1Q9D3E6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stag1Q9D3E6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms