Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chaf1bQ9D0N7 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chaf1bQ9D0N7 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Chaf1bQ9D0N7 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chaf1bQ9D0N7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chaf1bQ9D0N7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Chaf1bQ9D0N7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chaf1bQ9D0N7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.95□□□□□ -0.02
Chaf1bQ9D0N7 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Chaf1bQ9D0N7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Chaf1bQ9D0N7 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chaf1bQ9D0N7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chaf1bQ9D0N7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chaf1bQ9D0N7 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chaf1bQ9D0N7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chaf1bQ9D0N7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chaf1bQ9D0N7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.93□□□□□ -0.02
Chaf1bQ9D0N7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.93□□□□□ -0.02
Chaf1bQ9D0N7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Chaf1bQ9D0N7 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chaf1bQ9D0N7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chaf1bQ9D0N7 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chaf1bQ9D0N7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chaf1bQ9D0N7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chaf1bQ9D0N7 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chaf1bQ9D0N7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.93□□□□□ -0.02
Chaf1bQ9D0N7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chaf1bQ9D0N7 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Chaf1bQ9D0N7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chaf1bQ9D0N7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chaf1bQ9D0N7 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chaf1bQ9D0N7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chaf1bQ9D0N7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chaf1bQ9D0N7 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chaf1bQ9D0N7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chaf1bQ9D0N7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.92□□□□□ -0.02
Chaf1bQ9D0N7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chaf1bQ9D0N7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.92□□□□□ -0.02
Chaf1bQ9D0N7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.92□□□□□ -0.02
Chaf1bQ9D0N7 Gm18115-201ENSMUST00000221209 621 ntBASIC14.92□□□□□ -0.02
Chaf1bQ9D0N7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Chaf1bQ9D0N7 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chaf1bQ9D0N7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chaf1bQ9D0N7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.92□□□□□ -0.02
Chaf1bQ9D0N7 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chaf1bQ9D0N7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Chaf1bQ9D0N7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chaf1bQ9D0N7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms