Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nip7Q9CXK8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nip7Q9CXK8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nip7Q9CXK8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nip7Q9CXK8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.68■□□□□ 0.74
Nip7Q9CXK8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nip7Q9CXK8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nip7Q9CXK8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nip7Q9CXK8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nip7Q9CXK8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nip7Q9CXK8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nip7Q9CXK8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nip7Q9CXK8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nip7Q9CXK8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nip7Q9CXK8 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nip7Q9CXK8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nip7Q9CXK8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nip7Q9CXK8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Nip7Q9CXK8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nip7Q9CXK8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Nip7Q9CXK8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nip7Q9CXK8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nip7Q9CXK8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nip7Q9CXK8 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nip7Q9CXK8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nip7Q9CXK8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nip7Q9CXK8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nip7Q9CXK8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.66■□□□□ 0.74
Nip7Q9CXK8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Nip7Q9CXK8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nip7Q9CXK8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nip7Q9CXK8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nip7Q9CXK8 Gm45747-201ENSMUST00000212203 999 ntBASIC19.66■□□□□ 0.74
Nip7Q9CXK8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nip7Q9CXK8 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC19.66■□□□□ 0.74
Nip7Q9CXK8 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.66■□□□□ 0.74
Nip7Q9CXK8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Nip7Q9CXK8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nip7Q9CXK8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.66■□□□□ 0.74
Nip7Q9CXK8 Gm13294-201ENSMUST00000121757 1330 ntBASIC19.66■□□□□ 0.74
Nip7Q9CXK8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nip7Q9CXK8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nip7Q9CXK8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Nip7Q9CXK8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nip7Q9CXK8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nip7Q9CXK8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nip7Q9CXK8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nip7Q9CXK8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.65■□□□□ 0.74
Nip7Q9CXK8 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19.65■□□□□ 0.74
Nip7Q9CXK8 Gm27494-201ENSMUST00000184735 189 ntBASIC19.65■□□□□ 0.74
Nip7Q9CXK8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.65■□□□□ 0.74
Nip7Q9CXK8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nip7Q9CXK8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nip7Q9CXK8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Nip7Q9CXK8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nip7Q9CXK8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nip7Q9CXK8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nip7Q9CXK8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Nip7Q9CXK8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
Nip7Q9CXK8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
Nip7Q9CXK8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nip7Q9CXK8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nip7Q9CXK8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nip7Q9CXK8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nip7Q9CXK8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19.64■□□□□ 0.73
Nip7Q9CXK8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.64■□□□□ 0.73
Nip7Q9CXK8 Mir1895-201ENSMUST00000122615 79 ntBASIC19.64■□□□□ 0.73
Nip7Q9CXK8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Nip7Q9CXK8 Gm5177-201ENSMUST00000183092 997 ntBASIC19.64■□□□□ 0.73
Nip7Q9CXK8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nip7Q9CXK8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Nip7Q9CXK8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nip7Q9CXK8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nip7Q9CXK8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.64■□□□□ 0.73
Nip7Q9CXK8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nip7Q9CXK8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nip7Q9CXK8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nip7Q9CXK8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nip7Q9CXK8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nip7Q9CXK8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nip7Q9CXK8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nip7Q9CXK8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nip7Q9CXK8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Nip7Q9CXK8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Nip7Q9CXK8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nip7Q9CXK8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Nip7Q9CXK8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.63■□□□□ 0.73
Nip7Q9CXK8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nip7Q9CXK8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nip7Q9CXK8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.63■□□□□ 0.73
Nip7Q9CXK8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.63■□□□□ 0.73
Nip7Q9CXK8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC19.63■□□□□ 0.73
Nip7Q9CXK8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
Nip7Q9CXK8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nip7Q9CXK8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nip7Q9CXK8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nip7Q9CXK8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nip7Q9CXK8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nip7Q9CXK8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nip7Q9CXK8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms