Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Rnf135Q9CWS1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf135Q9CWS1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Rnf135Q9CWS1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.52■□□□□ 0.24
Rnf135Q9CWS1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf135Q9CWS1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf135Q9CWS1 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Rnf135Q9CWS1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
Rnf135Q9CWS1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Rnf135Q9CWS1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf135Q9CWS1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Rnf135Q9CWS1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf135Q9CWS1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf135Q9CWS1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf135Q9CWS1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf135Q9CWS1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf135Q9CWS1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf135Q9CWS1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Rnf135Q9CWS1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf135Q9CWS1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Rnf135Q9CWS1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf135Q9CWS1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf135Q9CWS1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Rnf135Q9CWS1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf135Q9CWS1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf135Q9CWS1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.51■□□□□ 0.23
Rnf135Q9CWS1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf135Q9CWS1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf135Q9CWS1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf135Q9CWS1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.51■□□□□ 0.23
Rnf135Q9CWS1 Gm7153-201ENSMUST00000117092 455 ntBASIC16.51■□□□□ 0.23
Rnf135Q9CWS1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Rnf135Q9CWS1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf135Q9CWS1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.51■□□□□ 0.23
Rnf135Q9CWS1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf135Q9CWS1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rnf135Q9CWS1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf135Q9CWS1 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf135Q9CWS1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf135Q9CWS1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.51■□□□□ 0.23
Rnf135Q9CWS1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Rnf135Q9CWS1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf135Q9CWS1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf135Q9CWS1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf135Q9CWS1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms