Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smc3Q9CW03 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc3Q9CW03 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Smc3Q9CW03 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc3Q9CW03 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc3Q9CW03 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.65■□□□□ 0.58
Smc3Q9CW03 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smc3Q9CW03 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Smc3Q9CW03 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.65■□□□□ 0.58
Smc3Q9CW03 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc3Q9CW03 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc3Q9CW03 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Smc3Q9CW03 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Smc3Q9CW03 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smc3Q9CW03 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smc3Q9CW03 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc3Q9CW03 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc3Q9CW03 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc3Q9CW03 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc3Q9CW03 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc3Q9CW03 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.64■□□□□ 0.57
Smc3Q9CW03 Mir6982-201ENSMUST00000184354 68 ntBASIC18.64■□□□□ 0.57
Smc3Q9CW03 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc3Q9CW03 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Smc3Q9CW03 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc3Q9CW03 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc3Q9CW03 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc3Q9CW03 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc3Q9CW03 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc3Q9CW03 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc3Q9CW03 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.64■□□□□ 0.57
Smc3Q9CW03 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.64■□□□□ 0.57
Smc3Q9CW03 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc3Q9CW03 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc3Q9CW03 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc3Q9CW03 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc3Q9CW03 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc3Q9CW03 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc3Q9CW03 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc3Q9CW03 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smc3Q9CW03 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smc3Q9CW03 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc3Q9CW03 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.63■□□□□ 0.57
Smc3Q9CW03 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.63■□□□□ 0.57
Smc3Q9CW03 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc3Q9CW03 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Smc3Q9CW03 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc3Q9CW03 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc3Q9CW03 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.63■□□□□ 0.57
Smc3Q9CW03 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc3Q9CW03 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Smc3Q9CW03 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc3Q9CW03 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc3Q9CW03 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.62■□□□□ 0.57
Smc3Q9CW03 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms