Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Otud1Q9CUB6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Otud1Q9CUB6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Otud1Q9CUB6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Otud1Q9CUB6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Otud1Q9CUB6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Otud1Q9CUB6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.97□□□□□ -0.01
Otud1Q9CUB6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Otud1Q9CUB6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Otud1Q9CUB6 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.97□□□□□ -0.01
Otud1Q9CUB6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Otud1Q9CUB6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Otud1Q9CUB6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Otud1Q9CUB6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Otud1Q9CUB6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Otud1Q9CUB6 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Otud1Q9CUB6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Otud1Q9CUB6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.96□□□□□ -0.01
Otud1Q9CUB6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Otud1Q9CUB6 Gm18195-201ENSMUST00000207604 706 ntBASIC14.96□□□□□ -0.01
Otud1Q9CUB6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.96□□□□□ -0.01
Otud1Q9CUB6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Otud1Q9CUB6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Otud1Q9CUB6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Otud1Q9CUB6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Otud1Q9CUB6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Otud1Q9CUB6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Otud1Q9CUB6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Otud1Q9CUB6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Otud1Q9CUB6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Otud1Q9CUB6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Otud1Q9CUB6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Otud1Q9CUB6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Otud1Q9CUB6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.94□□□□□ -0.02
Otud1Q9CUB6 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.94□□□□□ -0.02
Otud1Q9CUB6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Otud1Q9CUB6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Otud1Q9CUB6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Otud1Q9CUB6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Otud1Q9CUB6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Otud1Q9CUB6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Otud1Q9CUB6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Otud1Q9CUB6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Otud1Q9CUB6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Otud1Q9CUB6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Otud1Q9CUB6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.93□□□□□ -0.02
Otud1Q9CUB6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Otud1Q9CUB6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.93□□□□□ -0.02
Otud1Q9CUB6 Gm18733-201ENSMUST00000173950 856 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms