Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Gm12428-201ENSMUST00000119844 727 ntBASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Gm27622-201ENSMUST00000183779 60 ntBASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Gm27430-201ENSMUST00000184585 107 ntBASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Mir6977-201ENSMUST00000184960 64 ntBASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Gm44333-201ENSMUST00000197168 107 ntBASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Gm18246-201ENSMUST00000221023 728 ntBASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cldnd1Q9CQX5 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 Grk6-207ENSMUST00000225925 2769 ntBASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldnd1Q9CQX5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 Gm23547-201ENSMUST00000158210 271 ntBASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cldnd1Q9CQX5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 Gm6257-201ENSMUST00000163864 910 ntBASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cldnd1Q9CQX5 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms